BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C04SP1|AL426334
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig134 1472 0.0
>3x_Contig134
Length = 1400
Score = 1472 bits (736), Expect = 0.0
Identities = 772/791 (97%), Gaps = 2/791 (0%)
Strand = Plus / Plus
Query: 1 gagaatctttaatggattttttcaatgacagatgcttaaaacaattaactactgctgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gagaatctttaatggattttttcaatgacagatgcttaaaacaattaactactgctgaac 655
Query: 61 taatttcgttcaagaacaatattcctgagggcaaagaactaaacgattatgtcgaggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 taatttcgttcaagaacaatattcctgagggcaaagaactaaacgattatgtcgaggttt 715
Query: 121 cagatattagcagaatgtattatatccagaaagatagtgctgtwatgttatcggtattta 180
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 716 cagatattagcagaatgtattatatcccgaaagatagtgctgtaatgttatcggtattta 775
Query: 181 tgaatatgtttcatactctagcgaactttccacttctacaagattcctacgaaaaggtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tgaatatgtttcatactctagcgaactttccacttctacaagattcctacgaaaaggtta 835
Query: 241 ctttcaaaaccttgttaaaggccacgctattactagtcaaggaaagagccatcaagtaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ctttcaaaaccttgttaaaggccacgctattactagtcaaggaaagagccatcaagtaca 895
Query: 301 ccgattggraaaagtacaatgatttgaaaatgctatttattacgctctctttggaaaaga 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 ccgattggaaaaagtacaatgatttgaaaatgctatttattacgctctctttggaaaaga 955
Query: 361 atatcaaagctgaacctctcatggactcttcggctctatctgattgtnaggrttggraag 420
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||
Sbjct: 956 atatcaaagctgaacctctcatggactcttcggctctatctgattgtaaggattggaaag 1015
Query: 421 gggtcattagatcttataacggaactgattttgatgaattgaaagtwaatgcaaatnatc 480
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 1016 gggtcattagatcttataacggaactgattttgatgaattgaaagtaaatgcaaataatc 1075
Query: 481 ttcttcactttttggcattgatattggctctttctcgctgctgcattttgaacaattgtd 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 ttcttcactttttggcattgatattggctctttctcgctgctgcattttgaacaattgta 1135
Query: 541 aaattgacaatgatgttttggcgaagagcttagaggacttcaaacatcaagctcttaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 aaattgacaatgatgttttggcgaagagcttagaggacttcaaacatcaagctcttaata 1195
Query: 601 ttgtdcgcacaatgaaccccgagattatatcaatgtcagactgtttggattcatcaatca 660
|||| ||||||||||||||||||| ||| || ||||||||||||||||||||||||||
Sbjct: 1196 ttgtacgcacaatgaaccccgaga--ataaaaaagtcagactgtttggattcatcaatca 1253
Query: 661 catatwcccaattttccatggccgttaatgatgttgcccctaatcttttawrtcccttga 720
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1254 catatacccaattttccatggccgttaatgatgttgcccctaatcttttaaatcccttga 1313
Query: 721 daatgctaatggaacatgttctttatatggatagagatctcgtagacgcggacgttcttc 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 aaatgctaatggaacatgttctttatatggatagagatctcgtagacgcggacgttcttc 1373
Query: 781 aaccaatctca 791
|||||||||||
Sbjct: 1374 aaccaatctca 1384
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5973
Number of Sequences: 1807
Number of extensions: 5973
Number of successful extensions: 145
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)